robotpkg/math/py-eigenpy bulk build results

--- Environment --- tag=Rocky-8-x86_64 PKG_CONFIG=/usr/bin/pkg-config LC_MONETARY=C _override_vars_math_py_eigenpy=PKGREQD LOWER_OPSYS=rocky LANG=C OS_VERSION=8 PKGTOOLS_VERSION=20211115.3 PYTHON36_INCLUDE=/usr/include/python3.6m/ _override_vars_archivers_pax=PKGREQD PKGREQD BULK_LOGDIR=/local/robotpkg/var/log/bulk GXX=/usr/bin/g++ OLDPWD=/local/robotpkg/var/lib/robotpkg/middleware/ros-genmsg TAR=/usr/bin/tar MACHINE_KERNEL=Linux-4.18.0-553.97.1.el8_10.x86_64-x86_64 PKG_CONFIG_LIBDIR=/usr/lib64/pkgconfig:/usr/share/pkgconfig SETUPTOOLS_USE_DISTUTILS=stdlib _override_vars_pkgtools_digest=PKGREQD PKGREQD PYTHON36=/usr/bin/python3.6 OWNER_GID=robots TNFTP=/opt/openrobots/sbin/tnftp PYTHON36_LIB=/usr/lib64/libpython3.6m.so MAKECONF=/opt/robotpkg/etc/robotpkg.conf _overrides_archivers_pax_PKGREQD=pax pax _overrides_pkgtools_tnftp_PKGREQD=tnftp>=20130505~ssl tnftp>=20130505~ssl MFLAGS=--no-print-directory EXPECT_TARGETS=package CC=/usr/bin/gcc _override_vars_devel_jrl_cmakemodules=PKGREQD PKGREQD PKGREQD ROBOTPKG_DIR=/local/robotpkg/var/lib/robotpkg LC_COLLATE=C _overrides_math_eigen3_PKGREQD=eigen3>=3.0.0 eigen3>=3.0.0 eigen3>=3.0.0 PATCH=/usr/bin/patch --posix ROBOTPKG_BASE=/local/robotpkg MACHINE_PLATFORM=Rocky-8-x86_64 PWD=/local/robotpkg/var/lib/robotpkg/math/py-eigenpy LC_CTYPE=C NODENAME=hydra64-rocky8.laas.fr OS_KERNEL_VERSION=4.18.0-553.97.1.el8_10.x86_64 PKG_DBDIR=/opt/openrobots/var/db/robotpkg RECURSIVE_PKGPATH=math/py-eigenpy LOWER_OS_KERNEL=linux PAX=/usr/bin/pax OPSYS=Rocky _ROBOTPKG_NOW=0210155839 _overrides_pkgtools_digest_PKGREQD=digest>=20080510 digest>=20080510 _overrides_devel_jrl_cmakemodules_PKGREQD=jrl-cmakemodules>=1.1.0 jrl-cmakemodules>=1.1.0 jrl-cmakemodules>=1.1.0 bf= _override_vars_math_eigen3=PKGREQD PKGREQD PKGREQD PYTHON_INCLUDE_CONFIG=/usr/include/python3.6m/ PYTHON_INCLUDE=/usr/include/python3.6m/ LC_NUMERIC=C OWNER_UID=rbulk _override_vars_pkgtools_tnftp=PKGREQD PKGREQD FC=false MACHINE_ARCH=x86_64 ECHO_N=echo -n BULKBASE=/opt/openrobots hline="$bf======================================================================$rm" _override_vars_pkgtools_pkg_install=PKGREQD PKGREQD PKGREQD CXX=/usr/bin/g++ PY_NUMPY_INCLUDE_DIR=/usr/lib64/python3.6/site-packages/numpy/core/include LOCALBASE=/opt/openrobots MAKEOVERRIDES=${-*-command-variables-*-} LC_MESSAGES=C _overrides_pkgtools_pkg_install_PKGREQD=pkg_install>=20110805.12 pkg_install>=20110805.12 pkg_install>=20110805.12 GZIP_CMD=/usr/bin/gzip MAKELEVEL=4 rm= PYTHONDONTWRITEBYTECODE=1 SHLVL=4 LOWER_ARCH=x86_64 PYTHONPATH= ZCAT=/usr/bin/zcat DIGEST=/opt/openrobots/sbin/robotpkg_digest CMAKE=/usr/bin/cmake PYTHON_LIB=/usr/lib64/libpython3.6m.so CXXCPP=/usr/bin/g++ -E LOWER_OS_VERSION=8 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin ROBOTPKG_TRUSTED_ENV=robotpkg GCC=/usr/bin/gcc PKG_CONFIG_PATH=/opt/openrobots/share/pkgconfig PYTHON=/usr/bin/python3.6 MAKEFLAGS= --no-print-directory -- PKGREQD.cmdline=py36-eigenpy-3.12.0~!doc RECURSIVE_PKGPATH=math/py-eigenpy\ tag=Rocky-8-x86_64 BULK_LOGDIR=/local/robotpkg/var/log/bulk BULKBASE=/opt/openrobots LOCALBASE=/opt/openrobots PKG_DBDIR=/opt/openrobots/var/db/robotpkg EXPECT_TARGETS=package _overrides_math_py_eigenpy_PKGREQD=py36-eigenpy-3.12.0~!doc OS_KERNEL=Linux CPP=/usr/bin/gcc -E LC_TIME=C _=/usr/bin/env --- Running set -e; cd /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 && cd '/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0' && /usr/bin/env MAKELEVEL= 'CPPFLAGS=' 'CFLAGS=-pipe -O3 -DNDEBUG' 'LDFLAGS=' 'CXXFLAGS=-pipe -O3 -DNDEBUG' PREFIX='/opt/openrobots' HOME=/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work PATH='/opt/openrobots/sbin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin' LD_LIBRARY_PATH='' LOCALBASE=/opt/openrobots PKGMANDIR=man make -f Makefile all /usr/bin/cmake -S/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 -B/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/CMakeFiles /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0' make -f CMakeFiles/eigenpy.dir/build.make CMakeFiles/eigenpy.dir/depend make[2]: Entering directory '/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0' cd /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/CMakeFiles/eigenpy.dir/DependInfo.cmake --color= make[2]: Leaving directory '/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0' make -f CMakeFiles/eigenpy.dir/build.make CMakeFiles/eigenpy.dir/build make[2]: Entering directory '/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0' [ 0%] Building CXX object CMakeFiles/eigenpy.dir/src/solvers/preconditioners.cpp.o /usr/bin/g++ -Deigenpy_EXPORTS -I/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 -isystem /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include -isystem /usr/include/eigen3 -isystem /usr/include/python3.6m -isystem /usr/lib64/python3.6/site-packages/numpy/core/include -Wno-long-long -Wall -Wextra -Wcast-align -Wcast-qual -Wformat -Wwrite-strings -Wconversion -pipe -O3 -DNDEBUG -fPIC -Wno-conversion -MD -MT CMakeFiles/eigenpy.dir/src/solvers/preconditioners.cpp.o -MF CMakeFiles/eigenpy.dir/src/solvers/preconditioners.cpp.o.d -o CMakeFiles/eigenpy.dir/src/solvers/preconditioners.cpp.o -c /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/preconditioners.cpp [ 1%] Building CXX object CMakeFiles/eigenpy.dir/src/solvers/solvers.cpp.o /usr/bin/g++ -Deigenpy_EXPORTS -I/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 -isystem /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include -isystem /usr/include/eigen3 -isystem /usr/include/python3.6m -isystem /usr/lib64/python3.6/site-packages/numpy/core/include -Wno-long-long -Wall -Wextra -Wcast-align -Wcast-qual -Wformat -Wwrite-strings -Wconversion -pipe -O3 -DNDEBUG -fPIC -Wno-conversion -MD -MT CMakeFiles/eigenpy.dir/src/solvers/solvers.cpp.o -MF CMakeFiles/eigenpy.dir/src/solvers/solvers.cpp.o.d -o CMakeFiles/eigenpy.dir/src/solvers/solvers.cpp.o -c /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/solvers.cpp [ 2%] Building CXX object CMakeFiles/eigenpy.dir/src/solvers/minres.cpp.o /usr/bin/g++ -Deigenpy_EXPORTS -I/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 -isystem /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include -isystem /usr/include/eigen3 -isystem /usr/include/python3.6m -isystem /usr/lib64/python3.6/site-packages/numpy/core/include -Wno-long-long -Wall -Wextra -Wcast-align -Wcast-qual -Wformat -Wwrite-strings -Wconversion -pipe -O3 -DNDEBUG -fPIC -Wno-conversion -MD -MT CMakeFiles/eigenpy.dir/src/solvers/minres.cpp.o -MF CMakeFiles/eigenpy.dir/src/solvers/minres.cpp.o.d -o CMakeFiles/eigenpy.dir/src/solvers/minres.cpp.o -c /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/minres.cpp [ 3%] Building CXX object CMakeFiles/eigenpy.dir/src/solvers/bicgstab.cpp.o /usr/bin/g++ -Deigenpy_EXPORTS -I/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 -isystem /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include -isystem /usr/include/eigen3 -isystem /usr/include/python3.6m -isystem /usr/lib64/python3.6/site-packages/numpy/core/include -Wno-long-long -Wall -Wextra -Wcast-align -Wcast-qual -Wformat -Wwrite-strings -Wconversion -pipe -O3 -DNDEBUG -fPIC -Wno-conversion -MD -MT CMakeFiles/eigenpy.dir/src/solvers/bicgstab.cpp.o -MF CMakeFiles/eigenpy.dir/src/solvers/bicgstab.cpp.o.d -o CMakeFiles/eigenpy.dir/src/solvers/bicgstab.cpp.o -c /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/bicgstab.cpp [ 4%] Building CXX object CMakeFiles/eigenpy.dir/src/solvers/conjugate-gradient.cpp.o /usr/bin/g++ -Deigenpy_EXPORTS -I/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 -isystem /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include -isystem /usr/include/eigen3 -isystem /usr/include/python3.6m -isystem /usr/lib64/python3.6/site-packages/numpy/core/include -Wno-long-long -Wall -Wextra -Wcast-align -Wcast-qual -Wformat -Wwrite-strings -Wconversion -pipe -O3 -DNDEBUG -fPIC -Wno-conversion -MD -MT CMakeFiles/eigenpy.dir/src/solvers/conjugate-gradient.cpp.o -MF CMakeFiles/eigenpy.dir/src/solvers/conjugate-gradient.cpp.o.d -o CMakeFiles/eigenpy.dir/src/solvers/conjugate-gradient.cpp.o -c /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/conjugate-gradient.cpp [ 4%] Building CXX object CMakeFiles/eigenpy.dir/src/solvers/least-squares-conjugate-gradient.cpp.o /usr/bin/g++ -Deigenpy_EXPORTS -I/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0 -isystem /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include -isystem /usr/include/eigen3 -isystem /usr/include/python3.6m -isystem /usr/lib64/python3.6/site-packages/numpy/core/include -Wno-long-long -Wall -Wextra -Wcast-align -Wcast-qual -Wformat -Wwrite-strings -Wconversion -pipe -O3 -DNDEBUG -fPIC -Wno-conversion -MD -MT CMakeFiles/eigenpy.dir/src/solvers/least-squares-conjugate-gradient.cpp.o -MF CMakeFiles/eigenpy.dir/src/solvers/least-squares-conjugate-gradient.cpp.o.d -o CMakeFiles/eigenpy.dir/src/solvers/least-squares-conjugate-gradient.cpp.o -c /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/least-squares-conjugate-gradient.cpp In file included from /usr/include/eigen3/Eigen/IterativeLinearSolvers:39, from /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include/eigenpy/solvers/LeastSquaresConjugateGradient.hpp:9, from /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/least-squares-conjugate-gradient.cpp:5: /usr/include/eigen3/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h: In instantiation of 'Eigen::LeastSquareDiagonalPreconditioner<_Scalar>& Eigen::LeastSquareDiagonalPreconditioner<_Scalar>::factorize(const MatType&) [with MatType = Eigen::Ref<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >; _Scalar = double]': /usr/include/eigen3/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h:221:5: required from 'Derived& Eigen::IterativeSolverBase<Derived>::factorize(const Eigen::EigenBase<OtherDerived>&) [with MatrixDerived = Eigen::Matrix<double, -1, -1>; Derived = Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >]' /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include/eigenpy/solvers/IterativeSolverBase.hpp:86:28: required from 'static IterativeSolver& eigenpy::IterativeSolverVisitor<IterativeSolver>::factorize(IterativeSolver&, const MatrixType&) [with IterativeSolver = Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >; eigenpy::IterativeSolverVisitor<IterativeSolver>::MatrixType = Eigen::Matrix<double, -1, -1>]' /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include/eigenpy/solvers/IterativeSolverBase.hpp:59:27: required from 'void eigenpy::IterativeSolverVisitor<IterativeSolver>::visit(PyClass&) const [with PyClass = boost::python::class_<Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >, boost::noncopyable_::noncopyable, boost::python::detail::not_specified, boost::python::detail::not_specified>; IterativeSolver = Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >]' /usr/include/boost/python/def_visitor.hpp:31:9: required from 'static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor<eigenpy::IterativeSolverVisitor<Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> > > >; classT = boost::python::class_<Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >, boost::noncopyable_::noncopyable, boost::python::detail::not_specified, boost::python::detail::not_specified>]' /usr/include/boost/python/def_visitor.hpp:67:34: required from 'void boost::python::def_visitor<DerivedVisitor>::visit(classT&) const [with classT = boost::python::class_<Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >, boost::noncopyable_::noncopyable, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = eigenpy::IterativeSolverVisitor<Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> > >]' /usr/include/boost/python/class.hpp:221:9: required from 'boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def(const boost::python::def_visitor<Derived>&) [with Derived = eigenpy::IterativeSolverVisitor<Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> > >; W = Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >; X1 = boost::noncopyable_::noncopyable; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; boost::python::class_<T, X1, X2, X3>::self = boost::python::class_<Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >, boost::noncopyable_::noncopyable, boost::python::detail::not_specified, boost::python::detail::not_specified>]' /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/include/eigenpy/solvers/LeastSquaresConjugateGradient.hpp:38:10: required from 'static void eigenpy::LeastSquaresConjugateGradientVisitor<LeastSquaresConjugateGradient>::expose(const string&) [with LeastSquaresConjugateGradient = Eigen::LeastSquaresConjugateGradient<Eigen::Matrix<double, -1, -1>, Eigen::LeastSquareDiagonalPreconditioner<double> >; std::__cxx11::string = std::__cxx11::basic_string<char>]' /local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0/src/solvers/least-squares-conjugate-gradient.cpp:23:7: required from here /usr/include/eigen3/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h:171:32: error: 'const class Eigen::Ref<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >' has no member named 'innerVector'; did you mean 'InnerIterator'? RealScalar sum = mat.innerVector(j).squaredNorm(); ~~~~^~~~~~~~~~~ InnerIterator make[2]: *** [CMakeFiles/eigenpy.dir/build.make:149: CMakeFiles/eigenpy.dir/src/solvers/least-squares-conjugate-gradient.cpp.o] Error 1 make[2]: Leaving directory '/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0' make[1]: Leaving directory '/local/robotpkg/var/tmp/robotpkg/math/py-eigenpy/work/eigenpy-3.12.0' make[1]: *** [CMakeFiles/Makefile2:1990: CMakeFiles/eigenpy.dir/all] Error 2 make: *** [Makefile:149: all] Error 2